The presence of pBBR-AGGA or pBBR-FLGA in the corresponding mutant was confirmed by plasmid purification and restriction enzyme digestion. Swarm and swimming motility assay TPX-0005 mouse A fresh colony of

tested strains was grown to an OD600 of 0.8 in LB media. The cultures (1 ml) were spotted onto a swarm LB plate (0.5% agar) or stabbed into a swimming LB plate (0.2% agar). All plates were incubated at the room temperature for 48 h. Images were acquired using Alpha Innotech’s Fluorchem imaging system. SSA biofilm assay The SSA biofilm formation assay used is based on the method previously reported [57]. In brief, 3 ml of fresh LB in 15 ml glass tubes were inoculated with S. oneidensis strains from an overnight culture in LB at 200 rpm. After 16, 24, 32, or 40 h of incubation at 200 rpm at room temperature, 500 μl of 1% (wt/vol) crystal violet (CV) solution

was added to each tube and incubated for 15 min. Tubes were rinsed three times with 5 ml of distilled H2O and air dried. Biofilm formation was quantified by measuring the absorbance at 575 nm. Each assay was performed four times. Thin layer chromatography (TLC) analysis Supernatants and pellicles were collected after 36 h of growth in static LB media. Pellicles were treated with 100 μg/mL proteinase K for removal INK1197 clinical trial of cells. Cell-less pellicles and supernatants were subjected to exopolysaccharide extraction and hydrolysis with trifluoroacetic acid as described previously [58]. The resulting monosaccharides were dissolved in ddH2O in the concentration of 10 mg/ml, and 2 μl of the sample was spotted onto TLC plates (silica gel 60 F254; Sirolimus research buy Merck). After development in butan-1-ol-acetone-water (4:5:1), the

TLC plates were dipped in the reagent aniline-diphenylamine in acetone and incubated for 2 to 5 min at 100°C. Acknowledgements This research was supported by Major State Basic Research Development Program (973 Program: 2010CB833803) and National Natural Science Foundation of China (30870032) to HG. This research was also supported by Chinese Science Foundation for Distinguished Group (No.50321402) to YL. This research was also supported by The U.S. Department of Energy under the Genomics: GTL Program through Shewanella Federation, Office of Biological and Environmental Research, Office of Science. Electronic supplementary material Additional file 1: Primers used in this study. File contains all primers used in this study (PDF 12 KB) References 1. O’Toole G, Kaplan HB, Kolter R: Biofilm formation as microbial development. Ann Rev Microbiol 2000, 54:49–79.CrossRef 2. Watnick P, Kolter R: Biofilm, city of microbes. J Bacteriol 2000, 182:2675–2679.PubMedCrossRef 3. Stoodley P, Sauer K, Davies DG, Costerton JW: Biofilms as complex differentiated communities. Ann Rev Microbiol 2002, 56:187–209.CrossRef 4. Kolter R, Greenberg EP: Microbial sciences-The superficial life of microbes. Selleck Bleomycin Nature 2006, 441:300–302.PubMedCrossRef 5. Goller CC, Romeo T: Environmental Influences on Biofilm Development.